Seqera.

Seqera Platform is an intuitive, centralized command post that enables data analysis at scale, allowing users to launch, manage, and monitor scalable Nextflow pipelines and compute environments on-premises or across cloud providers.

Supported tools and triggers

Each tool is a typed function your agent can call. Each trigger fires an agent run when something changes upstream.

Create Wave Container

Tool to submit a request to Wave for accessing a private container registry or building a container image on-the-fly. Use when you need to provision containers via Wave with Dockerfile, Conda recipe, or package specifications. Returns the name of the container made available by Wave.

TOOL

Get Organization Details

Tool to retrieve detailed information about a specific organization.

TOOL

Get Service Info

Tool to retrieve information about the Seqera API service. Use when you need to check the service version and commit ID for troubleshooting.

TOOL

Get User Info

Tool to retrieve information about the authenticated user. Use when you need to fetch details of the current user after authentication.

TOOL

Get Wave Build Logs

Tool to get logs for a container build by build ID. Use when you need to troubleshoot or inspect the build process of a Wave container.

TOOL

Get Wave Build Status

Tool to retrieve the status of a Wave container build by build ID. Use when you need to check if a container build is completed and whether it succeeded.

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Inspect Wave Container

Tool to inspect container image metadata via Wave. Use when you need registry, manifest, digest, configuration, and OCI compatibility information about a container image.

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List Action Event Types

Tool to list supported action event types. Use when you need to discover available triggers for pipelines, optionally filtered by workspace.

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List Compute Environments

Tool to retrieve a list of compute environments. Use when you need to page, sort, or filter compute environments accessible to your account.

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List Organizations

Tool to list all organizations. Use after authentication to retrieve accessible Seqera organizations.

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List Pipelines

Tool to list all pipelines accessible to the authenticated user. Use when you need to browse pipelines with optional pagination, sorting, or search filters.

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List Workflows

Tool to list workflows. Use when you need to retrieve workflows filtered by workspace and paginated.

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Validate Action Name

Tool to validate action name. Use when you need to confirm if an action name is valid and available before creating an action. Returns validation status with details.

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Validate Pipeline Name

Tool to validate a pipeline name. Use when you need to check if a given pipeline name is valid and available before creating or updating one.

TOOL

Integrations›Seqera